Michaelis-Menten reaction rate for enzymatic reactions. More...
Public Member Functions | |
MichaelisMentenReactionRate (const speciesTable &species, const dictionary &dict) | |
Construct from dictionary. More... | |
void | preEvaluate () const |
Pre-evaluation hook. More... | |
void | postEvaluate () const |
Post-evaluation hook. More... | |
scalar | operator() (const scalar p, const scalar T, const scalarField &c, const label li) const |
Return the rate. More... | |
scalar | ddT (const scalar p, const scalar T, const scalarField &c, const label li) const |
The derivative of the rate w.r.t. temperature. More... | |
bool | hasDdc () const |
Is the rate a function of concentration? More... | |
void | ddc (const scalar p, const scalar T, const scalarField &c, const label li, scalarField &ddc) const |
The derivative of the rate w.r.t. concentration. More... | |
void | write (Ostream &os) const |
Write to stream. More... | |
Static Public Member Functions | |
static word | type () |
Return the type name. More... | |
Friends | |
Ostream & | operator<< (Ostream &, const MichaelisMentenReactionRate &) |
Michaelis-Menten reaction rate for enzymatic reactions.
Michaelis, L., & Menten, M. L. (1913). Die Kinetik der InwertinWirkung. Biochem., (49), 333-369.
Definition at line 62 of file MichaelisMentenReactionRate.H.
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Construct from dictionary.
Definition at line 29 of file MichaelisMentenReactionRateI.H.
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inlinestatic |
Return the type name.
Definition at line 95 of file MichaelisMentenReactionRate.H.
References Foam::constant::universal::c, MichaelisMentenReactionRate::ddc(), MichaelisMentenReactionRate::ddT(), MichaelisMentenReactionRate::hasDdc(), p, MichaelisMentenReactionRate::postEvaluate(), MichaelisMentenReactionRate::preEvaluate(), Foam::T(), and MichaelisMentenReactionRate::write().
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Pre-evaluation hook.
Definition at line 43 of file MichaelisMentenReactionRateI.H.
Referenced by MichaelisMentenReactionRate::type().
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inline |
Post-evaluation hook.
Definition at line 47 of file MichaelisMentenReactionRateI.H.
Referenced by MichaelisMentenReactionRate::type().
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inline |
Return the rate.
Definition at line 52 of file MichaelisMentenReactionRateI.H.
References MichaelisMentenReactionRate::ddT().
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The derivative of the rate w.r.t. temperature.
Definition at line 64 of file MichaelisMentenReactionRateI.H.
Referenced by MichaelisMentenReactionRate::operator()(), and MichaelisMentenReactionRate::type().
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inline |
Is the rate a function of concentration?
Definition at line 75 of file MichaelisMentenReactionRateI.H.
References MichaelisMentenReactionRate::ddc().
Referenced by MichaelisMentenReactionRate::type().
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inline |
The derivative of the rate w.r.t. concentration.
Definition at line 82 of file MichaelisMentenReactionRateI.H.
References Foam::sqr().
Referenced by MichaelisMentenReactionRate::hasDdc(), and MichaelisMentenReactionRate::type().
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inline |
Write to stream.
Definition at line 95 of file MichaelisMentenReactionRateI.H.
References Foam::writeEntry().
Referenced by MichaelisMentenReactionRate::type().
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